KEGG   Mus musculus (house mouse): 22066
Entry
22066             CDS       T01002                                 
Symbol
Trpc4, CCE1, STRPC4, Trp4, Trrp4
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4
  KO
K04967  transient receptor potential cation channel subfamily C member 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
mmu04929  GnRH secretion
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    22066 (Trpc4)
  09158 Development and regeneration
   04360 Axon guidance
    22066 (Trpc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    22066 (Trpc4)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   22066 (Trpc4)
SSDB
Motif
Pfam: Ion_trans TRP_2 Ank_2 Ank Ank_4 Ank_3 PKD_channel Cadherin_2
Other DBs
NCBI-GeneID: 22066
NCBI-ProteinID: NP_058680
MGI: 109525
Ensembl: ENSMUSG00000027748
UniProt: Q9QUQ5 Q0VB97 Q8BNT2
Structure
Position
3:54063441..54225892
AA seq 974 aa
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIREAKTEEGLTEENVKELKQDISSFRFEVLGLLRGSKLSTIQSANAASSADSDEKSQSE
GNGKDKRKNLSLFDLTTLIHPRSAAIASERHNLSNGSALVVQEPPREKQRKVNFVADIKN
FGLFHRRSKQNAAEQNANQIFSVSEEITRQQAAGALERNIELESKGLASRGDRSIPGLNE
QCVLVDHRERNTDTLGLQVGKRVCSTFKSEKVVVEDTVPIIPKEKHAHEEDSSIDYDLSP
TDTAAHEDYVTTRL
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggctcagttctattacaaaagaaatgtcaacgccccctacagagaccgcatcccactg
aggattgtcagagcagaatctgagctctcaccatcagagaaagcctacttgaatgctgtg
gagaagggggactatgcaagcgtcaagaagtctctggaggaagctgagatttattttaaa
atcaacattaactgcatcgaccccctgggaaggaccgccctcctcattgccattgaaaat
gagaatctggagcttattgaactattgttgagtttcaatgtctatgtaggcgatgcgctg
cttcacgccatcagaaaagaggtggttggagccgtggagctactgctgaaccacaaaaag
ccaagtggagagaagcaggtgcctcccattctccttgataaacagttctctgaattcact
ccggacatcacacccatcatcttggctgcacatacaaataattacgagataatcaaactt
ttggttcagaaaggtgtctcagtgcccagaccccacgaggtccgctgtaactgtgttgag
tgtgtctccagctcggatgtggacagcctcaggcattcacggtccaggctcaacatctac
aaggccttggccagcccctcgctcattgccctgtcaagcgaagaccctttccttactgcc
tttcagttaagttgggagctgcaagaactcagcaaggtggagaacgaattcaagtcggag
tatgaggagctgtctagacagtgcaaacaatttgccaaggacctcctagatcagacacgg
agttccagagagctggaaatcattcttaattaccgtgatgacaatagtctgatcgaagaa
cagagtggaaatgatcttgcaaggctaaaattagccattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcttcccgctggtacgatgagttcccaggc
tggaggagaagacactgggcggtgaagatggtgacgtgtttcataataggactactcttc
cccgtcttctccgtgtgctacctgatagctcccaaaagcccacttggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatctgacctttttgtttctgctg
ctgctagcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtggagtggatgatattaccgtgggtcctgggttttatatggggagagattaaacag
atgtgggatggcggactccaggattacatccatgactggtggaatctaatggactttgtg
atgaactccttgtatctggcaacaatctccttgaagattgtcgcgtttgtaaagtacagt
gctctgaacccacgggaatcatgggacatgtggcaccccaccctggtggcagaggcatta
tttgctattgcaaacatcttcagttccctccgcctgatctctctgttcactgccaattct
cacctggggcctctgcagatatctctgggaaggatgcttctggacatcctgaagttcttg
ttcatctactgcctcgtgctgctagcttttgcaaatggcctaaatcagctgtacttttac
tatgaagaaacaaaggggctaagctgcaaaggcatccggtgcgagaaacagaacaacgcg
ttttccacgttattcgagacactacagtccctgttttggtcaatatttggactcatcaat
ctctatgttaccaatgtcaaagcccagcacgagttcactgagtttgttggggccaccatg
tttggcacatataatgtcatctctctggttgtcctgctgaacatgttaattgctatgatg
aataattcttaccaactaattgccgaccatgcagatatagaatggaaatttgctcgaaca
aagctttggatgagctactttgaagaaggaggtaccctgcctacacctttcaatgtcatc
ccaagccccaagtccctgtggtacctggtcaagtggatatggacacacttatgtaagaaa
aaaatgagaaggaagccagaaagcttcgggacaattgggcggcgtgctgctgataacttg
agaagacatcaccaataccaagaggtgatgaggaacctggtgaagcggtacgtggcagcc
atgatcagagaggcaaaaaccgaagaaggcttgacggaggagaatgttaaggaactaaag
caagacatttctagcttccgcttcgaagttctgggattgctcagaggaagcaagctctct
acaatacagtcagccaacgcggcgagttcagcggactccgacgagaagagccagagcgaa
ggtaatggcaaggacaagagaaagaatctcagcctctttgatttaaccactctgatccac
ccgcggtcggcagccattgcctccgagagacataacctaagcaatggttccgccctggtg
gtgcaggagccgcccagggagaagcagaggaaagtgaattttgtggctgatatcaaaaac
ttcgggttatttcatagacggtcaaaacaaaatgctgctgagcaaaacgcaaaccaaatc
ttctctgtttcagaagaaattactcgtcaacaggcggcaggagcacttgagcgaaatatc
gaactggaatccaaaggattagcttcacggggtgaccgcagcattcctggtctcaatgaa
cagtgtgtgctagtagaccatagagaaaggaatacggacactttgggtttacaggtaggc
aagagagtgtgctccaccttcaagtcggagaaggtggtggtggaagacaccgtccctatt
ataccaaaggagaaacacgcccacgaggaggactcgagcatagactatgacttaagcccc
acggacacagctgcccacgaagattatgtgaccacaagattgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (47)   
   RefSeq(nuc) (15)   
   GenBank (16)   
   EMBL (16)   
3D Structure (3)   
   PDB (3)   
Protein domain (8)   
   Pfam (8)   
All databases (94)   

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